InterSystems OMOP Platform Transformation Details
You can find the mapping of FHIR resource to OMOP tables below. Note that this transformation maps 14 FHIR resources to 10 OMOP tables. A single FHIR resource type can map to different OMOP tables based on the clinical domain of the data concept.
FHIR to OMOP
| FHIR Resource | OMOP Table |
|---|---|
| Address | Location |
| AllergyIntolerance | Condition_Occurrence |
| Measurement | |
| Observation | |
| Procedure_Occurrence | |
| Condition | Condition_Occurrence |
| Measurement | |
| Observation | |
| Procedure_Occurrence | |
| Encounter | Visit_Occurrence |
| Immunization | Drug_Exposure |
| Location | Care_Site |
| MedicationAdministration | Drug_Exposure |
| MedicationRequest | Drug_Exposure |
| Observation | Condition_Occurrence |
| Measurement | |
| Observation | |
| Procedure_Occurrence | |
| Organization | Care_Site |
| Patient | Person |
| Practitioner | Provider |
| PractitionerRole | Provider |
| Procedure | Condition_Occurrence |
| Measurement | |
| Observation | |
| Procedure_Occurrence |
For a mapping of which OMOP field comes from which FHIR field, see the below OMOP table pages.
- Care_Site – Mapping of FHIR fields to OMOP Care_Site fields.
- Condition_Occurence – Mapping of FHIR fields to OMOP Condition_Occurence fields.
- Drug_Exposure – Mapping of FHIR fields to OMOP Drug_Exposure fields.
- Location – Mapping of FHIR fields to OMOP Location fields.
- Measurement – Mapping of FHIR fields to OMOP Measurement fields.
- Observation – Mapping of FHIR fields to OMOP Observation fields.
- Person – Mapping of FHIR fields to OMOP Person fields.
- Procedure_Occurence – Mapping of FHIR fields to OMOP Procedure_Occurence fields.
- Provider – Mapping of FHIR fields to OMOP Provider fields.
- Visit_Occurence – Mapping of FHIR fields to OMOP Visit_Occurence fields.