Measurement

Mapping of FHIR fields to OMOP Measurement fields.

Measurement Mapping

Multiple FHIR fields populate the properties of the OMOP Measurement field. You can see which OMOP Measurement field property is populated by which FHIR field below.

Measurement_Date

Populated by several different FHIR fields:

Condition.onsetPeriod, Condition.onsetDatetime, Condition.encounter
Observation.effectivePeriod, Observation.effectiveDateTime, Observation.encounter
Procedure.performedPeriod, Procedure.performedDateTime, Procedure.encounter

Measurement_Datetime

Populated by several different FHIR fields:

Condition.onsetPeriod, Condition.onsetDatetime, Condition.encounter
Observation.effectivePeriod, Observation.effectiveDateTime, Observation.encounter
Procedure.performedPeriod, Procedure.performedDateTime, Procedure.encounter

Measurement_Concept_Id

Populated by several different FHIR fields:

Condition.code.coding(x)
Observation.coder
Procedure.code

Measurement_Source_Concept_Id

Populated by several different FHIR fields:

Condition.code.coding(x)
Observation.coder
Procedure.code

Measurement_Source_Value

Populated by several different FHIR fields:

Condition.code.coding(x)
Observation.coder
Procedure.code

Person_Id

Populated by several different FHIR fields:

Condition.subject
Observation.subject

Provider_Id

Populated by several different FHIR fields:

Condition.recorder, Condition.asserter, Condition.encounter
Observation.performer(x), Observation.encounter
Procedure.performer(x).actor, Procedure.asserter, Procedure.encounter

Unit_Concept_Id

Populated by the FHIR field Observation.valueQuantity.

Unit_Source_Concept_Id

Populated by the FHIR field Observation.valueQuantity.

Unit_Source_Value

Populated by the FHIR field Observation.valueQuantity.

Value_As_Concept_Id

Populated by several different FHIR fields:

Observation.code, Observation.interpretation(1).coding(x)
Procedure.code

Value_As_Number

Populated by the FHIR field Observation.valueQuantity.

Value_Source_Value

Populated by the FHIR field Observation.interpretation(1).coding(x).

Visit_Occurrence_Id

Populated by several different FHIR fields:

Condition.encounter
Observation.encounter
Procedure.encounter